Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_111284759_111286423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111284759 - 111286423

Intron Length:

1665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTAAATTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

IRTRLANRFYRRISALVWEV

Intron Amino Acid Position:

1219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.7

0.35

1.1

68.7

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015277

111268416 - 111324851

56436