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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111286545_111286827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111286545 - 111286827

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TGTTTCTTAACA

Flanking Amino Acid:

ISGIDQLLTLDISAAFAGPV

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

81.4

0.71

0.9

77.5

35.6

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

85.7

1.12

0.9

87.92

29.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015277

111268416 - 111324851

56436