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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111313286_111314257_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111313286 - 111314257

Intron Length:

972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTCTTACACG

Flanking Amino Acid:

VQMLCSSFSVGGMFLATGST

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.1

1.09

0.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

35.9

-1.6

49.5

46.7

Minor BPS

55.5

0.03

2.2

70.57

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015277

111268416 - 111324851

56436