Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_111354771_111356182_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111354771 - 111356182

Intron Length:

1412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTTGT

5'SS Class:

major

3'SS Sequence:

CAATACTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

CTTTCAATACTT

Flanking Amino Acid:

KKDSLTSPQMLPALKIRYQC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.4

38.1

Major BPS

71.4

0.53

67.3

39.3

Major PPT

0.45

0.9

66.4

39.8

Minor 5ss

42.1

-0.9

2.9

56.1

43.3

Minor BPS

48.4

-0

2.1

73.84

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035183

111343013 - 111358101

15089