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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111356489_111357683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

111356489 - 111357683

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

CAATGATGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

74.5

37.6

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

72.8

0.51

0.8

69.9

29.3

Minor 5ss

39.2

-1.2

2.9

49.4

46.6

Minor BPS

46.4

-0.2

2.1

64.45

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035183

111343013 - 111358101

15089

ENSAPLT00000015052

111343013 - 111358101

15089