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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111407708_111408095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111407708 - 111408095

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTTAAA

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATA

Flanking Amino Acid:

RHFSNEWINMMDFRKLKILF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

70.5

34.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.2

0.97

0.6

92.2

18.2

Minor 5ss

41.3

-1

2.5

47.7

43.1

Minor BPS

77.2

0.85

79.7

29.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017990

111406089 - 111409058

2970