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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111439189_111439684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111439189 - 111439684

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTAAATAAAT

Flanking Amino Acid:

VVVRCCCLKKGSTYESEARK

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.3

0.79

0.7

30.8

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

50.7

0.1

2.1

81.25

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015025

111426663 - 111452643

25981

ENSAPLT00000015013

111426663 - 111444485

17823