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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111439710_111442329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111439710 - 111442329

Intron Length:

2620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTCTAATGACA

Flanking Amino Acid:

KKGSTYESEARKISATKKTD

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

-0.2

1.9

62.91

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015025

111426663 - 111452643

25981

ENSAPLT00000015013

111426663 - 111444485

17823