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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1114708_1114944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1114708 - 1114944

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

TTTTCTTTTTCA

Flanking Amino Acid:

FTVGSICTTIYQASGGSIDW

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

69.9

0.5

31.5

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

-0.2

3.6

78.96

37.6

Associated Gene:

Gene:

CPA2

Ensembl Gene ID:

ENSAPLG00000005551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005786

1114443 - 1122885

8443