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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111578390_111581785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111578390 - 111581785

Intron Length:

3396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTATCCGTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TTATCCGTCACA

Flanking Amino Acid:

VDVSDARPGTNPTTRRSAKT

Intron Amino Acid Position:

1589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

29.8

Major BPS

0.47

1.2

61.1

45.5

Major PPT

74.7

0.56

0.9

68.6

Minor 5ss

35.7

-1.6

3.5

47.5

42.5

Minor BPS

55.4

0.16

2.4

76.04

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041510

111555616 - 111773710

218095

ENSAPLT00000028239

111555616 - 111733883

178268