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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111590543_111597519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111590543 - 111597519

Intron Length:

6977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAGAT

U12 Branch Point Sequence:

AACTCCTGACAT

Flanking Amino Acid:

RREQRLKRLRDAKSLAEMLM

Intron Amino Acid Position:

1490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

57.5

0.19

52.7

34.2

Major PPT

84.8

0.78

0.7

77.9

36.6

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

1.8

66.02

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041510

111555616 - 111773710

218095

ENSAPLT00000028239

111555616 - 111733883

178268