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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111607590_111608426_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

111607590 - 111608426

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACCAGC

5'SS Class:

major

3'SS Sequence:

TCCTGTGAGGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ACTTCTTTAATG

Flanking Amino Acid:

PAPTVKWMKDSNGTPSLVMI

Intron Amino Acid Position:

1183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

67.1

44.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

56.8

0.15

1.1

53.9

40.6

Minor 5ss

45.3

-0.5

2.7

61.2

43.3

Minor BPS

0.58

1.3

69.15

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041510

111555616 - 111773710

218095

ENSAPLT00000028239

111555616 - 111733883

178268