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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111641436_111647935_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111641436 - 111647935

Intron Length:

6500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

ATATCCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATATATTTAACA

Flanking Amino Acid:

SSQSIRVTWKAPKKHLQNGI

Intron Amino Acid Position:

867

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

100

1.24

0.5

100

Major PPT

0.61

0.8

74.5

35.4

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

69.9

0.62

1.4

75.87

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041510

111555616 - 111773710

218095

ENSAPLT00000028239

111555616 - 111733883

178268