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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111661341_111664380_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

111661341 - 111664380

Intron Length:

3040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AAACCACCTGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCTTTTCAAAC

Flanking Amino Acid:

VGDEVISTLQILPTVREDSG

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

57.6

0.17

0.9

49.1

34.4

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

56.1

0.17

1.6

67.06

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041510

111555616 - 111773710

218095

ENSAPLT00000028239

111555616 - 111733883

178268