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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1116615_1116972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1116615 - 1116972

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TGTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAAGAT

U12 Branch Point Sequence:

ATTTGCTCCATA

Flanking Amino Acid:

PDGYEFTHTTNRMWRKTRSK

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.4

32.4

Major BPS

52.3

0.06

1.3

49.1

44.8

Major PPT

93.4

0.98

0.7

92.3

26.6

Minor 5ss

31.8

-2.1

2.7

38.8

40.3

Minor BPS

46.7

-0.2

2.3

65.69

41.3

Associated Gene:

Gene:

CPA2

Ensembl Gene ID:

ENSAPLG00000005551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005786

1114443 - 1122885

8443