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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111700144_111709453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111700144 - 111709453

Intron Length:

9310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTAATTCTCACT

Flanking Amino Acid:

VEHQSQLIVRVPPRFVVQPS

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

78.3

0.64

0.7

72.3

25.9

Minor 5ss

35.1

-1.7

2.7

42.8

Minor BPS

46.5

-0.1

69.64

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028239

111555616 - 111733883

178268

ENSAPLT00000041510

111555616 - 111773710

218095