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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111722664_111725210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111722664 - 111725210

Intron Length:

2547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

AAGTACTCATCT

Flanking Amino Acid:

AQDYVQVVLEDGTPKIISAF

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

72.2

39.5

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

78.4

0.64

0.9

32.5

Minor 5ss

29.1

-2.4

2.8

35.6

Minor BPS

47.5

-0.1

65.32

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041510

111555616 - 111773710

218095

ENSAPLT00000028239

111555616 - 111733883

178268