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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_112095501_112097497_R

Intron Information:

Intron Rank:
130275
Intron Class:
major
Intron Phase:
Intron Coordinates:
112095501 - 112097497
Intron Length:
1997

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAGCAAGA
5'SS Class:
major
3'SS Sequence:
TTTTCATTTTGAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TCTTTTTCATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
67.9
0.42
1.2
62.6
43.8
Major BPS
100
1.24
0.5
100
0
Major PPT
69
0.43
1.7
81.6
35
Minor 5ss
37
-1.5
3.2
49.3
46.5
Minor BPS
50.8
0.1
1.8
70.88
41.3

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000017299
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000024987
112092782 - 112099132
6351