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Intron Name: Anas_platyrhynchos_platyrhynchos_1_112181307_112202124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112181307 - 112202124

Intron Length:

20818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGAGTG

5'SS Class:

major

3'SS Sequence:

TCTGTTTCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAA

U12 Branch Point Sequence:

TGAATATGAAAA

Flanking Amino Acid:

EMLLGTPPQALNILVDTGSS

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

61.1

43.9

Major BPS

66.7

0.41

57.8

Major PPT

75.8

0.58

37.4

Minor 5ss

33.1

-1.9

3.7

47.1

48.3

Minor BPS

44.5

-0.4

1.7

53.63

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042558

112180992 - 112204954

23963