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Intron Name: Anas_platyrhynchos_platyrhynchos_1_112645490_112659501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112645490 - 112659501

Intron Length:

14012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTTCCTATAG

Flanking Amino Acid:

SWLCESTLHSDWQIATLALL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

72.5

33.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.3

0.79

0.6

80.9

24.5

Minor 5ss

38.7

-1.3

3.1

51.6

45.1

Minor BPS

49.1

-0.2

2.1

65.07

42.5

Associated Gene:

Gene:

TMEM47

Ensembl Gene ID:

ENSAPLG00000007982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048490

112645264 - 112849982

204719

ENSAPLT00000020793

112645264 - 112879824

234561

ENSAPLT00000008281

112645264 - 112668782

23519