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Intron Name: Anas_platyrhynchos_platyrhynchos_1_112809130_112849917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112809130 - 112849917

Intron Length:

40788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGGGTTCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

ELLLCSEAIEAWVVLDGEQK

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.2

0.43

0.9

65.9

40.9

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

TMEM47

Ensembl Gene ID:

ENSAPLG00000007982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048490

112645264 - 112849982

204719