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Intron Name: Anas_platyrhynchos_platyrhynchos_1_113357639_113357677_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

113357639 - 113357677

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCTTGTTAT

5'SS Class:

weak_major

3'SS Sequence:

TTTTATTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTTATTTAATA

Flanking Amino Acid:

KCIKMPPTFYVDLVNIGSSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.5

61.7

39.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

80.4

0.68

0.9

77.9

Minor 5ss

36.4

-1.5

3.9

54.7

42.9

Minor BPS

76.1

0.82

1.3

84.11

29.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008080

113357525 - 113484406

126882