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Intron Name: Anas_platyrhynchos_platyrhynchos_1_113376014_113425919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113376014 - 113425919

Intron Length:

49906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTACA

5'SS Class:

strong_major

3'SS Sequence:

AATTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTATGTTAATT

Flanking Amino Acid:

LGIEKLLDPEDVATACPDKK

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

81.8

31.1

Major BPS

84.4

0.85

34.5

Major PPT

80.3

0.68

0.9

70.8

40.1

Minor 5ss

32.4

-2

2.4

35.7

40.3

Minor BPS

56.4

0.28

2.1

76.87

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008080

113357525 - 113484406

126882