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Intron Name: Anas_platyrhynchos_platyrhynchos_1_113953571_113963484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113953571 - 113963484

Intron Length:

9914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTACTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

CTGCATTTGACT

Flanking Amino Acid:

KKIQKQSVQERVSEREAALE

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

66.6

40.4

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

0.45

64.4

41.4

Minor 5ss

34.2

-1.8

2.8

46.1

Minor BPS

54.4

0.22

1.6

69.18

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042654

113867080 - 114209156

342077

ENSAPLT00000017032

113867080 - 114209156

342077