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Intron Name: Anas_platyrhynchos_platyrhynchos_1_114009999_114013448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114009999 - 114013448

Intron Length:

3450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTCATGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TGATACTTAATT

Flanking Amino Acid:

SELRKKSLNIRSHLEASTDQ

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.6

40.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

80.4

0.68

0.9

37.1

Minor 5ss

32.2

-2

3.4

46.9

48.4

Minor BPS

72.3

0.78

1.4

83.09

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042654

113867080 - 114209156

342077

ENSAPLT00000017032

113867080 - 114209156

342077