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Intron Name: Anas_platyrhynchos_platyrhynchos_1_114023427_114046475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114023427 - 114046475

Intron Length:

23049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTTCTTATCT

Flanking Amino Acid:

SLQDHLEKVKVYRAEIVPLK

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

72.9

0.52

68.4

41.9

Minor 5ss

36.2

-1.6

3.5

52.1

45.1

Minor BPS

74.7

0.85

1.5

88.84

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042654

113867080 - 114209156

342077

ENSAPLT00000017032

113867080 - 114209156

342077