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Intron Name: Anas_platyrhynchos_platyrhynchos_1_114091862_114127629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114091862 - 114127629

Intron Length:

35768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATTTTGCTAACT

Flanking Amino Acid:

ISPNKVPYYINHETQTTCWD

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.8

23.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.6

0.71

0.9

77.2

37.1

Minor 5ss

35.6

-1.6

2.8

42.6

38.4

Minor BPS

54.9

0.23

2.3

82.68

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042654

113867080 - 114209156

342077

ENSAPLT00000017032

113867080 - 114209156

342077