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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1141105_1141733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1141105 - 1141733

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GGCTGCTGATGT

Flanking Amino Acid:

RMGCPELQIGEASISSLKQA

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

85.8

0.81

0.9

80.6

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

40.1

-0.6

2.2

54.05

46.9

Associated Gene:

Gene:

TMEM209

Ensembl Gene ID:

ENSAPLG00000004647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004819

1137334 - 1147787

10454