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Intron Name: Anas_platyrhynchos_platyrhynchos_1_114174448_114178449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114174448 - 114178449

Intron Length:

4002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CCTGTTTTATTC

Flanking Amino Acid:

LNDSISPNESIDDEHLLIQH

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

74.7

41.5

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

81.1

0.7

0.9

72.6

42.4

Minor 5ss

37.6

-1.4

2.8

47.1

41.6

Minor BPS

47.3

-0.2

1.6

52.16

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042654

113867080 - 114209156

342077

ENSAPLT00000017032

113867080 - 114209156

342077