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Intron Name: Anas_platyrhynchos_platyrhynchos_1_114363239_114366120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

114363239 - 114366120

Intron Length:

2882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TATCGCTCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTTTCTGCAATT

Flanking Amino Acid:

LEAVCFQTREILDAMNKDCG

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

0.82

0.8

24.9

Major PPT

77.9

0.63

0.9

73.9

36.4

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

57.4

0.31

2.2

83.73

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020356

114357274 - 114388610

31337

ENSAPLT00000038194

114353691 - 114382353

28663

ENSAPLT00000003288

114356152 - 114383183

27032

ENSAPLT00000036685

114355166 - 114382353

27188

ENSAPLT00000035996

114356152 - 114388610

32459

ENSAPLT00000048325

114353691 - 114388610

34920

ENSAPLT00000026617

114356152 - 114388610

32459

ENSAPLT00000041825

114356152 - 114382353

26202