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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1154153_1154388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1154153 - 1154388

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

CTTTGCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

AACACCAAAAAA

Flanking Amino Acid:

PILVLFTIFYPTNFTLVFSD

Intron Amino Acid Position:

689

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.3

72.2

39.5

Major BPS

0.3

62.3

30.4

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

-2.1

2.7

33.5

Minor BPS

42.9

-0.5

1.9

50.29

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004537

1148923 - 1154844

5922