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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11542949_11555131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11542949 - 11555131

Intron Length:

12183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

TCTGCTCAGAGT

Flanking Amino Acid:

YTEKGEVYFIDHNTKTTSWL

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

35.2

Major BPS

63.7

0.34

1.6

39.9

Major PPT

93.5

0.98

0.6

92.1

18.4

Minor 5ss

34.4

-1.8

3.4

45.6

43.6

Minor BPS

40.3

-0.6

2.2

58.72

45.2

Associated Gene:

Gene:

MAGI2

Ensembl Gene ID:

ENSAPLG00000012418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012943

11484480 - 11769168

284689