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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116115033_116117895_R

Intron Information:

Intron Rank:

136519

Intron Class:

major

Intron Phase:

Intron Coordinates:

116115033 - 116117895

Intron Length:

2863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTTATATATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

89.3

0.88

0.7

88.1

28.9

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

48.6

-0.1

67.79

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032606

116114376 - 116118340

3965