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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116226296_116226852_R

Intron Information:

Intron Rank:

133610

Intron Class:

major

Intron Phase:

Intron Coordinates:

116226296 - 116226852

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AGCTTCTAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.5

0.71

0.8

77.1

31.8

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

52.3

0.15

1.8

67.79

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033955

116218122 - 116250450

32329