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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116580044_116622571_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116580044 - 116622571

Intron Length:

42528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTCTTCATT

Flanking Amino Acid:

MDKVITEEDKEHVKKKPLRK

Intron Amino Acid Position:

1434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.8

0.83

0.7

84.7

30.1

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

67.5

0.63

1.7

83.97

37.3

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370