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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116622669_116646121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116622669 - 116646121

Intron Length:

23453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTATTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGGTTTTTAATT

Flanking Amino Acid:

ACRKAILRPEYSDKALYTQL

Intron Amino Acid Position:

1402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.8

0.83

0.8

35.3

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

66.3

0.59

1.2

72.56

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370