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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116646239_116691021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116646239 - 116691021

Intron Length:

44783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTATACTCAAAA

Flanking Amino Acid:

IRRYLRKYYNGWLICEEPTC

Intron Amino Acid Position:

1363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

87.5

0.84

0.6

84.2

23.8

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

56.8

0.21

1.8

71.61

39.5

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370