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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116691154_116692756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116691154 - 116692756

Intron Length:

1603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTTAGTTTT

5'SS Class:

major

3'SS Sequence:

CTTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

TTGTTTTACACT

Flanking Amino Acid:

NIYDNVFDCSGRFIEPSLER

Intron Amino Acid Position:

1319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.2

80.3

35.1

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

86.3

0.82

0.8

83.9

31.1

Minor 5ss

-0.8

2.8

61.1

43.2

Minor BPS

49.7

0.06

2.1

74.34

43.4

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370