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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116700316_116703794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116700316 - 116703794

Intron Length:

3479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATACCT

Flanking Amino Acid:

GDTVSYIICQDGSNLSASQR

Intron Amino Acid Position:

1200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

100

1.24

0.5

100

Major PPT

72.1

0.5

0.8

64.9

36.3

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

64.7

0.54

1.9

88.42

36.6

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370