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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116703927_116705834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116703927 - 116705834

Intron Length:

1908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGATCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCTCCTTTGATC

Flanking Amino Acid:

IPVNQYEINKALTKDPQDYP

Intron Amino Acid Position:

1156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

0.87

0.8

85.6

Major PPT

80.5

0.69

0.8

78.1

36.1

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

66.7

0.51

1.2

70.57

35.3

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370