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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116705968_116707251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116705968 - 116707251

Intron Length:

1284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GATTTCTGAACT

Flanking Amino Acid:

DWCDLAKETGNYVIGQILSD

Intron Amino Acid Position:

1111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

82.1

0.8

71.6

36.4

Major PPT

82.6

0.73

0.9

76.8

36.7

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

71.5

0.75

1.4

83.01

37.3

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370