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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116707458_116709292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116707458 - 116709292

Intron Length:

1835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GGTGCATTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGGTTTTAATG

Flanking Amino Acid:

LDEVFKLGNKIKNEVNKLYK

Intron Amino Acid Position:

1043

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.36

57.4

42.4

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

60.6

0.2

1.5

61.75

41.5

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370