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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116748920_116750033_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

116748920 - 116750033

Intron Length:

1114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

ATGCCAAATGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AATTTTTTAAAT

Flanking Amino Acid:

QVFKKPIPKLVDEDEDFEDQ

Intron Amino Acid Position:

836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

79.8

35.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

56.5

0.15

49.6

37.9

Minor 5ss

37.9

-1.4

47.1

42.6

Minor BPS

0.71

1.3

80.49

34.7

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370