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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116750615_116751056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116750615 - 116751056

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TTTACTTTAACA

Flanking Amino Acid:

ILPEEILNMYSDSPHLIFML

Intron Amino Acid Position:

752

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

77.3

0.68

79.3

29.4

Major PPT

90.9

0.92

0.6

83.9

31.1

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

83.3

1.04

88.16

28.8

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370