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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116752255_116753888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116752255 - 116753888

Intron Length:

1634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTGTCGTAACC

Flanking Amino Acid:

IHKIDPDVVVGHNIYGFDLE

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

64.2

0.32

1.2

64.1

41.9

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

60.7

0.31

2.1

77.35

39.1

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370