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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116756036_116757293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116756036 - 116757293

Intron Length:

1258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGTATTTTGACA

Flanking Amino Acid:

TQNPQSHQNVIVAIAALIHQ

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

71.4

0.48

41.2

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

64.3

0.44

1.2

71.16

34.5

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370