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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116767027_116770383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116767027 - 116770383

Intron Length:

3357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GAATATTGAATT

Flanking Amino Acid:

DAYEDQYSQPGVVFLFGKVW

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.7

33.5

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

73.8

0.54

0.9

66.4

40.4

Minor 5ss

35.9

-1.6

2.6

42.5

44.2

Minor BPS

50.2

0.08

1.6

65.1

38.9

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370