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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116770563_116771447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116770563 - 116771447

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGGATC

5'SS Class:

major

3'SS Sequence:

TCTTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

ATAGTTTTACTT

Flanking Amino Acid:

LESEKKGTSALSCSLPDVSC

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

71.6

Major BPS

68.8

0.47

1.2

63.4

Major PPT

86.2

0.81

0.7

24.1

Minor 5ss

39.4

-1.2

3.3

40.8

Minor BPS

49.7

0.05

1.6

65.81

39.9

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370