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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116772047_116773922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116772047 - 116773922

Intron Length:

1876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAGTAA

5'SS Class:

major

3'SS Sequence:

AAATGTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAATTTTAAACT

Flanking Amino Acid:

PFSVQSQTPKVITPISKKAP

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

70.3

31.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.4

0.55

70.2

44.7

Minor 5ss

29.9

-2.3

3.3

37.1

47.5

Minor BPS

58.3

0.34

1.6

71.76

39.2

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370