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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116774022_116775505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116774022 - 116775505

Intron Length:

1484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GTTCAATATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TTTTGTTCAATA

Flanking Amino Acid:

GDILQDLNAETVQPSPPPII

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.47

42.9

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

58.7

0.27

1.9

75.09

37.1

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370